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     Strain Information: 1055/1


Division: Heterokontophyta    Class: Bacillariophyceae
Phaeodactylum tricornutum Bohlin (1897)
CCAP 1055/1
Isolator: De Martino & Ten-Hage (2003)
Origin: Marine; Blackpool, England,
Culture: Medium f/2 + Si; Axenic; sub + cryo
Other: Clone 8.6 isolated from CCMP 632. 12000 expressed sequence tags (ESTs) have been analysed from the genome of this clone and have been organised in a queryable database. Deposited by Bowler & De Martino.;

Algaebase record for Phaeodactylum tricornutum

References [14]  EMBL Links
Oudot-Le Secq MP, Grimwood J, Shapiro H, Armbrust EV, Bowler C & Green BR (2007) Chloroplast genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana: comparison with other plastid genomes of the red lineage. Molecular Genetics and Genomics 277: 427-439.
DOI: 10.1007/s00438-006-0199-4

Bowler C et al. (2008) The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature (Letters) 456: -.
DOI: 10.1038/nature07410

Gachon CMM, Day JG, Campbell CN, Pröschold T, Saxon RJ & Küpper FC (2007) The Culture Collection of Algae and Protozoa (CCAP): A biological resource for protistan genomics Gene 406: 51-57.
DOI: 10.1016/j.gene.2007.05.018

De Martino A, Meichenin A, Shi J, Pan K & Bowler C (2007) Genetic and phenotypic characterization of Phaeodactylum tricornutum (Bacillariophyceae) accessions. Journal of Phycology 43: 992-1009.
DOI: 10.1111/j.1529-8817.2007.00384.x

Huysman MJJ, Martens C, Vandepoele K, Gillard J, Rayko E, Heijde M, Bowler C, Inzé D, Van de Peer Y, De Veylder L & Vyverman W (2010) Genome-wide analysis of the diatom cell cycle unveils a novel type of cyclins involved in environmental signaling. Genome Biology 11: R17.
DOI: 10.1186/gb-2010-11-2-r17

Montsant A, Maheswari U, Bowler C & Lopez PJ (2005) Diatomics: Toward diatom functional genomics. Journal of Nanoscience and Nanotechnology 5: 1-11.
DOI: 10.1166/jnn.2005.003

Toda H & Itoh N (2011) Isolation and characterization of a gene encoding a S-adenosyl-L-methionine-dependent halide/thiol methyltransferase (HTMT) from the marine diatom Phaeodactylum tricornutum: Biogenic mechanism of CH3I emissions in oceans. Phytochemistry 72: 337-343.
DOI: 10.1016/j.phytochem.2010.12.003

De Martino A, Bartual A, Willis A, Meichenin A, Villazán B, Maheswari U & Bowler C (2011) Physiological and molecular evidence that environmental changes elicit morphological interconversion in the model diatom Phaeodactylum tricornutum. Protist 162: 462-481.
DOI: 10.1016/j.protis.2011.02.00

Yang EC, Boo GH, Kim HJ, Cho SM, Boo SM, Andersen RA & Yoon HS (2012) Supermatrix data highlight the phylogenetic relationships of photosynthetic stramenopiles. Protist 163: 217-231.
DOI: 10.1016/j.protis.2011.08.001

Shlykov MA, Zheng WH, Chen JS & Saier MH (2012) Bioinformatic characterization of the 4-Toluene Sulfonate Uptake Permease (TSUP) family of transmembrane proteins. Biochimica & Biophysica Acta 1818: 703-717.
DOI: 10.1016/j.bbamem.2011.12.005

Lei QY & Lu SH (2011) Molecular ecological responses of the dinoflagellate Karenia mikimotoi to phosphate stress. Harmful Algae 12: 39-45.
DOI: 10.1016/j.hal.2011.08.010

Momand J, Villegas A & Belyi VA (2011) The evolution of MDM2 family genes. Gene 486: 23-30.
DOI: 10.1016/j.gene.2011.06.030

Yu ET, Zendejas FJ, Lane PD, Gaucher S, Simmons BA & Lane TW (2009) Triacylglycerol accumulation and profiling in the model diatoms Thalassiosira pseudonana and Phaeodactylum tricornutum (Baccilariophyceae) during starvation Journal of Applied Phycology 21: 669-681.
DOI: 10.1007/s10811-008-9400-y

Lommer M, Specht M, Roy A, Kraemer L, Andreson R, Gutowska MA, Wolf J, Bergner SV, Schilhabel MB, Klostermeier UC, Beiko RG, Rosenstiel P, Hippler M & LaRoche J (2012) Genome and low-iron response of an oceanic diatom adapted to chronic iron limitation. Genome Biology 13: R66.
DOI: 10.1186/gb-2012-13-7-r66

DQ085801 ()
DQ287774 ()
EF067920 (Genome-Plastid)
BN001459 (nat1)